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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173310582_173322157_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173310582 - 173322157

Intron Length:

11576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAAAAT

U12 Branch Point Sequence:

AGGACATAAAAT

Flanking Amino Acid:

AIFAFEGIGVVLPLENRMKD

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

61.8

0.29

1.1

67.7

34.6

Major PPT

80.7

0.69

0.8

71.9

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

44.2

-0.3

58.8

43.4

Associated Gene:

Gene:

SLC36A4

Ensembl Gene ID:

ENSAPLG00000014091

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019731

173250462 - 173362370

111909

ENSAPLT00000014697

173278186 - 173362370

84185