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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173322328_173327672_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173322328 - 173327672

Intron Length:

5345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATGTTTTGAACA

Flanking Amino Acid:

SITLNLPQDKWLYQSVKILY

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

41.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

69.5

0.44

1.1

66.1

43.7

Minor 5ss

35.8

-1.6

3.3

43.3

45.4

Minor BPS

63.3

0.41

1.4

69.95

36.4

Associated Gene:

Gene:

SLC36A4

Ensembl Gene ID:

ENSAPLG00000014091

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014697

173278186 - 173362370

84185

ENSAPLT00000019731

173250462 - 173362370

111909