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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173327843_173361068_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173327843 - 173361068

Intron Length:

33226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TCTTGTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

GAATCTGCAGCC

Flanking Amino Acid:

AVRTLLVCSTCAVAVLIPRL

Intron Amino Acid Position:

416

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

0.55

1.1

63.4

44.3

Major PPT

78.8

0.65

0.9

76.9

37.3

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

40.7

-0.7

2.2

49.62

40.4

Associated Gene:

Gene:

SLC36A4

Ensembl Gene ID:

ENSAPLG00000014091

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019731

173250462 - 173362370

111909

ENSAPLT00000014697

173278186 - 173362370

84185