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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173425867_173439163_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

173425867 - 173439163

Intron Length:

13297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACACAT

5'SS Class:

major

3'SS Sequence:

TTTTCCTCAACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TTTTCCTCAACA

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

71.6

40.1

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

81.8

0.71

0.8

78.1

29.3

Minor 5ss

39.2

-1.2

3.2

56.5

47.6

Minor BPS

83.9

1.06

1.3

92.11

Associated Gene:

Gene:

MTNR1B

Ensembl Gene ID:

ENSAPLG00000014060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014643

173424143 - 173471769

47627