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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173439257_173447824_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173439257 - 173447824

Intron Length:

8568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

TTCTGTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

AGCACTTCAAAT

Flanking Amino Acid:

NNNDQMKTDTLAWEIWKVMD

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

70.9

39.3

Major BPS

77.3

0.68

81.5

Major PPT

81.8

0.71

0.8

77.2

31.6

Minor 5ss

38.9

-1.3

3.4

55.1

43.4

Minor BPS

48.3

-0

1.7

61.68

41.8

Associated Gene:

Gene:

MTNR1B

Ensembl Gene ID:

ENSAPLG00000014060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014643

173424143 - 173471769

47627