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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173448690_173470721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173448690 - 173470721

Intron Length:

22032

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTATTTTTATTT

Flanking Amino Acid:

VFKNRKLRNSGNAFVVSLAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.9

0.63

0.8

35.3

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

58.8

0.35

1.5

72.71

38.8

Associated Gene:

Gene:

MTNR1B

Ensembl Gene ID:

ENSAPLG00000014060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014643

173424143 - 173471769

47627