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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173579778_173581700_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173579778 - 173581700

Intron Length:

1923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTATCTAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTGTATCTAACA

Flanking Amino Acid:

NNVVDTIENEVSVMDQGQNY

Intron Amino Acid Position:

4381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

81.6

31.4

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

74.9

0.56

70.2

39.9

Minor 5ss

43.6

-0.7

2.6

59.8

44.7

Minor BPS

57.8

0.24

1.9

72.99

38.8

Associated Gene:

Gene:

FAT3

Ensembl Gene ID:

ENSAPLG00000013451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041352

173578478 - 173947310

368833

ENSAPLT00000030538

173578478 - 173902833

324356