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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173581761_173585572_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

173581761 - 173585572

Intron Length:

3812

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCCTGCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TTCCCTTTATTT

Flanking Amino Acid:

SFQSDSGDDNASIVTVIQLV

Intron Amino Acid Position:

4361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

82.5

29.7

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

57.1

0.16

1.1

55.8

Minor 5ss

35.3

-1.7

3.1

46.4

Minor BPS

61.8

0.45

1.6

76.8

40.5

Associated Gene:

Gene:

FAT3

Ensembl Gene ID:

ENSAPLG00000013451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041352

173578478 - 173947310

368833

ENSAPLT00000030538

173578478 - 173902833

324356