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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173598931_173607991_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173598931 - 173607991

Intron Length:

9061

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

GGCGCTTTGATT

Flanking Amino Acid:

TRANPCIILKIVDGKLWFQL

Intron Amino Acid Position:

3911

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

85.1

25.8

Major BPS

0.85

0.9

39.9

Major PPT

82.8

0.74

0.7

77.1

24.8

Minor 5ss

35.1

-1.7

2.7

42.4

44.3

Minor BPS

54.1

0.21

1.4

63.7

41.4

Associated Gene:

Gene:

FAT3

Ensembl Gene ID:

ENSAPLG00000013451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039744

173578478 - 173992244

413767

ENSAPLT00000030538

173578478 - 173902833

324356

ENSAPLT00000014065

173578478 - 173902833

324356

ENSAPLT00000041352

173578478 - 173947310

368833