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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173641698_173643144_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173641698 - 173643144

Intron Length:

1447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

TAATCAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATCAATT

Flanking Amino Acid:

NNKFFLDPENGELKSLAPLD

Intron Amino Acid Position:

3107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

36.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.3

0.5

67.9

Minor 5ss

37.4

-1.4

44.6

45.1

Minor BPS

57.3

0.31

82.92

37.9

Associated Gene:

Gene:

FAT3

Ensembl Gene ID:

ENSAPLG00000013451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039744

173578478 - 173992244

413767

ENSAPLT00000030538

173578478 - 173902833

324356

ENSAPLT00000014065

173578478 - 173902833

324356

ENSAPLT00000041352

173578478 - 173947310

368833