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Intron Name: Anas_platyrhynchos_platyrhynchos_1_173670452_173679675_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

173670452 - 173679675

Intron Length:

9224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCCTTA

5'SS Class:

weak_major

3'SS Sequence:

GTGCAACAATTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

GCTAATTTAATT

Flanking Amino Acid:

TACGQNCSTEGGNYDSSFDA

Intron Amino Acid Position:

1423

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.2

66.1

42.4

Major BPS

90.7

1.01

0.7

19.9

Major PPT

49.6

-0

46.1

40.5

Minor 5ss

56.7

0.23

2.7

73.5

43.1

Minor BPS

57.9

0.33

1.5

70.21

Associated Gene:

Gene:

FAT3

Ensembl Gene ID:

ENSAPLG00000013451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030538

173578478 - 173902833

324356

ENSAPLT00000014065

173578478 - 173902833

324356