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Intron Name: Anas_platyrhynchos_platyrhynchos_1_174267489_174268234_F

Intron Information:

Intron Rank:

143220

Intron Class:

major

Intron Phase:

Intron Coordinates:

174267489 - 174268234

Intron Length:

746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTAATTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

ATACTGCTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

26.2

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

77.5

0.62

0.9

73.6

40.6

Minor 5ss

41.1

-1

2.5

50.4

46.1

Minor BPS

44.8

-0.3

2.2

65.1

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044294

174266097 - 174268675

2579

ENSAPLT00000035295

174263412 - 174268675

5264