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Intron Name: Anas_platyrhynchos_platyrhynchos_1_174368958_174371239_F

Intron Information:

Intron Rank:

140309

Intron Class:

major

Intron Phase:

Intron Coordinates:

174368958 - 174371239

Intron Length:

2282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTATGT

5'SS Class:

major

3'SS Sequence:

CTTTTTTGTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TATTTCTTCAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

88.1

0.86

0.8

29.4

Minor 5ss

45.8

-0.4

2.9

65.8

45.2

Minor BPS

0.36

2.1

80.35

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046676

174368366 - 174384222

15857