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Intron Name: Anas_platyrhynchos_platyrhynchos_1_174741393_174741974_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

174741393 - 174741974

Intron Length:

582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTGTAT

5'SS Class:

major

3'SS Sequence:

GACATTTTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATGAAGT

Flanking Amino Acid:

PKPLETIKRPSPDEPMTNLQ

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

70.2

36.1

Major BPS

100

1.24

0.5

100

Major PPT

72.5

0.51

0.9

69.5

41.2

Minor 5ss

44.6

-0.6

3.2

64.1

47.4

Minor BPS

61.6

0.44

86.41

39.1

Associated Gene:

Gene:

CHORDC1

Ensembl Gene ID:

ENSAPLG00000000579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001034

174733180 - 174747958

14779