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Intron Name: Anas_platyrhynchos_platyrhynchos_1_174744764_174744997_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

174744764 - 174744997

Intron Length:

234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTTAGTATT

5'SS Class:

major

3'SS Sequence:

GCAAACTTTAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGTTTGTTAATT

Flanking Amino Acid:

YHSGVPIFHEGMKYWSCCKR

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.2

36.1

Major BPS

84.4

0.85

34.5

Major PPT

54.8

0.11

1.1

51.8

41.4

Minor 5ss

37.6

-1.4

2.7

45.2

42.4

Minor BPS

65.1

0.55

83.97

37.3

Associated Gene:

Gene:

CHORDC1

Ensembl Gene ID:

ENSAPLG00000000579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001034

174733180 - 174747958

14779