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Intron Name: Anas_platyrhynchos_platyrhynchos_1_174746272_174746757_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

174746272 - 174746757

Intron Length:

486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTTTAAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAG

U12 Branch Point Sequence:

TTAGCCTGACAA

Flanking Amino Acid:

LSYVEANSTMLNIHIVFEGE

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

73.7

31.1

Major BPS

60.8

0.27

1.6

60.1

46.3

Major PPT

81.7

0.71

0.9

86.7

24.5

Minor 5ss

36.2

-1.6

2.8

41.9

38.9

Minor BPS

47.9

-0.1

1.9

62.52

43.2

Associated Gene:

Gene:

CHORDC1

Ensembl Gene ID:

ENSAPLG00000000579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001034

174733180 - 174747958

14779