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Intron Name: Anas_platyrhynchos_platyrhynchos_1_174746821_174747337_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

174746821 - 174747337

Intron Length:

517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

GTTTTGTAAAGT

Flanking Amino Acid:

EFHRNVKLWGVIDVKRSYVN

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

80.8

33.6

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

94.1

0.99

0.5

92.8

16.8

Minor 5ss

40.6

-1.1

2.8

47.9

41.8

Minor BPS

46.1

-0.2

2.5

71.56

45.6

Associated Gene:

Gene:

CHORDC1

Ensembl Gene ID:

ENSAPLG00000000579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001034

174733180 - 174747958

14779