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Intron Name: Anas_platyrhynchos_platyrhynchos_1_174900912_174904174_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

174900912 - 174904174

Intron Length:

3263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

ATCCTCTGAAGT

Flanking Amino Acid:

ERLKTYKVSFDALFSAVVNF

Intron Amino Acid Position:

637

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

84.9

26.3

Major BPS

68.1

0.45

73.5

28.6

Major PPT

79.1

0.66

0.9

73.3

37.1

Minor 5ss

32.1

-2

2.8

39.2

40.5

Minor BPS

50.2

0.08

1.8

68.24

42.5

Associated Gene:

Gene:

NAALAD2

Ensembl Gene ID:

ENSAPLG00000012368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012920

174897555 - 174932937

35383