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Intron Name: Anas_platyrhynchos_platyrhynchos_1_174904440_174905091_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

174904440 - 174905091

Intron Length:

652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCCAT

5'SS Class:

major

3'SS Sequence:

GCTCTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

ATGGCACTGACA

Flanking Amino Acid:

SGRVRYTKNRKADKFSNYPV

Intron Amino Acid Position:

549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

68.8

43.8

Major BPS

66.1

0.4

31.5

Major PPT

86.1

0.81

0.8

83.9

31.1

Minor 5ss

39.1

-1.2

3.1

48.3

47.3

Minor BPS

45.7

-0.3

58.62

40.8

Associated Gene:

Gene:

NAALAD2

Ensembl Gene ID:

ENSAPLG00000012368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012920

174897555 - 174932937

35383