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Intron Name: Anas_platyrhynchos_platyrhynchos_1_174913884_174916465_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

174913884 - 174916465

Intron Length:

2582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTACAACCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

ACTTTTACAACC

Flanking Amino Acid:

GLLGSTEWAEENARVLQERA

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

85.6

24.6

Major BPS

0.75

78.6

Major PPT

65.6

0.35

0.9

56.8

38.7

Minor 5ss

34.4

-1.8

2.8

41.8

44.8

Minor BPS

48.7

-0.1

1.8

61.27

38.2

Associated Gene:

Gene:

NAALAD2

Ensembl Gene ID:

ENSAPLG00000012368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012920

174897555 - 174932937

35383