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Intron Name: Anas_platyrhynchos_platyrhynchos_1_174916549_174916982_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

174916549 - 174916982

Intron Length:

434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTAT

5'SS Class:

strong_major

3'SS Sequence:

TATGTGATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TGAAATTTAACT

Flanking Amino Acid:

VRSFGKMKMEGWRPRRTIIF

Intron Amino Acid Position:

416

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

1.1

30.2

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.54

66.6

43.6

Minor 5ss

47.4

-0.3

2.7

66.9

44.4

Minor BPS

62.4

0.47

1.5

75.8

40.2

Associated Gene:

Gene:

NAALAD2

Ensembl Gene ID:

ENSAPLG00000012368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012920

174897555 - 174932937

35383