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Intron Name: Anas_platyrhynchos_platyrhynchos_1_174959428_174960216_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
174959428 - 174960216

Intron Length:
789

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACAGAAA

5'SS Class:
major

3'SS Sequence:
TCTTTCCCAATAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTTAC

U12 Branch Point Sequence:
TCTTTCCCAATA

Flanking Amino Acid:
ISIIDEYGNEIFNTSLSEPP

Intron Amino Acid Position:
139

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.4
0.53
1.1
68.4
38.1

Major BPS
68.8
0.47
1.2
63.4
44

Major PPT
74.3
0.55
0.8
70.8
28.9

Minor 5ss
29.9
-2.3
3.3
39.1
46.3

Minor BPS
52.2
0.07
1.9
67.7
39.2

Associated Gene:

Gene:
FOLH1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

174939927 - 174964080
24154