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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175038316_175051024_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175038316 - 175051024

Intron Length:

12709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTCAGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TATTATCTAACT

Flanking Amino Acid:

PVLLFASDVRGLCVSRASAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

71.9

33.8

Major BPS

84.7

0.86

74.3

40.7

Major PPT

67.8

0.4

63.3

43.2

Minor 5ss

27.1

-2.6

26.1

Minor BPS

62.1

0.46

1.8

83.21

37.2

Associated Gene:

Gene:

NOX4

Ensembl Gene ID:

ENSAPLG00000012543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013095

175038220 - 175152063

113844