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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175052229_175052859_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175052229 - 175052859

Intron Length:

631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

TCGVTICIFSVLHVAAHLVN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

NOX4

Ensembl Gene ID:

ENSAPLG00000012543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013095

175038220 - 175152063

113844

ENSAPLT00000038844

175037575 - 175152043

114469

ENSAPLT00000026753

175037575 - 175171491

133917