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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175067453_175068925_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175067453 - 175068925

Intron Length:

1473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGTATG

5'SS Class:

major

3'SS Sequence:

TGTTCTCCCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

CTTGAGGTAACT

Flanking Amino Acid:

EPKFQSHFPETWFWISGPLC

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.3

74.4

41.9

Major BPS

58.9

0.22

49.8

35.1

Major PPT

74.8

0.56

0.8

69.7

31.2

Minor 5ss

40.8

-1

2.6

51.1

45.4

Minor BPS

42.3

-0.5

2.7

68.1

48.5

Associated Gene:

Gene:

NOX4

Ensembl Gene ID:

ENSAPLG00000012543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013095

175038220 - 175152063

113844

ENSAPLT00000038844

175037575 - 175152043

114469

ENSAPLT00000026753

175037575 - 175171491

133917