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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175086555_175107707_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175086555 - 175107707

Intron Length:

21153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTGTCCTGACA

Flanking Amino Acid:

VHLKVVGDWTERFRDLLLLH

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

0.61

37.5

Minor 5ss

41.2

-1

2.5

51.4

45.1

Minor BPS

58.5

0.26

1.8

74.62

36.9

Associated Gene:

Gene:

NOX4

Ensembl Gene ID:

ENSAPLG00000012543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038844

175037575 - 175152043

114469

ENSAPLT00000026753

175037575 - 175171491

133917

ENSAPLT00000013095

175038220 - 175152063

113844