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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175107790_175134564_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175107790 - 175134564

Intron Length:

26775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

GGTTTTCTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

CTTTCTCTAAAA

Flanking Amino Acid:

LPIFQQRRYPKLYVDGPFGS

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

80.7

33.7

Major BPS

0.57

73.6

28.6

Major PPT

72.7

0.51

1.1

75.9

38.4

Minor 5ss

36.8

-1.5

2.7

42.7

38.3

Minor BPS

60.1

0.31

1.8

73.18

38.6

Associated Gene:

Gene:

NOX4

Ensembl Gene ID:

ENSAPLG00000012543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038844

175037575 - 175152043

114469

ENSAPLT00000026753

175037575 - 175171491

133917

ENSAPLT00000013095

175038220 - 175152063

113844