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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175134685_175138059_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175134685 - 175138059

Intron Length:

3375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTGAG

5'SS Class:

major

3'SS Sequence:

TTTCATTTTCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAATTTTTAATT

Flanking Amino Acid:

TPFASVLNTLLDGWKRYKLR

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

65.6

40.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.9

0.61

75.4

38.3

Minor 5ss

34.9

-1.7

3.3

46.2

Minor BPS

0.83

1.1

81.34

34.2

Associated Gene:

Gene:

NOX4

Ensembl Gene ID:

ENSAPLG00000012543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038844

175037575 - 175152043

114469

ENSAPLT00000026753

175037575 - 175171491

133917

ENSAPLT00000013095

175038220 - 175152063

113844