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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175138770_175140863_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175138770 - 175140863

Intron Length:

2094

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAAAT

U12 Branch Point Sequence:

GCAGCTTGCAGT

Flanking Amino Acid:

LYLSQTDGIQKIIGEKYQAL

Intron Amino Acid Position:

488

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

72.3

37.8

Major BPS

62.1

0.3

1.2

67.3

37.8

Major PPT

89.3

0.88

0.7

84.9

29.9

Minor 5ss

39.1

-1.2

3.1

52.5

44.7

Minor BPS

39.1

-0.7

49.56

44.1

Associated Gene:

Gene:

NOX4

Ensembl Gene ID:

ENSAPLG00000012543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038844

175037575 - 175152043

114469

ENSAPLT00000026753

175037575 - 175171491

133917

ENSAPLT00000013095

175038220 - 175152063

113844