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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175146102_175148424_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175146102 - 175148424

Intron Length:

2323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGAGTA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

AGCTACTGATTT

Flanking Amino Acid:

LSNSSNSYGTRLEGSLFSYW

Intron Amino Acid Position:

573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.2

35.5

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

77.8

0.63

1.7

92.3

26.6

Minor 5ss

36.5

-1.5

3.3

47.7

47.8

Minor BPS

46.1

-0.2

1.8

61.16

42.5

Associated Gene:

Gene:

NOX4

Ensembl Gene ID:

ENSAPLG00000012543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038844

175037575 - 175152043

114469

ENSAPLT00000026753

175037575 - 175171491

133917