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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175148484_175152035_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175148484 - 175152035

Intron Length:

3552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGCAGA

5'SS Class:

strong_major

3'SS Sequence:

CCTGCCTGTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

ISFICPCKTGAS*

Intron Amino Acid Position:

593

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

70.6

41.3

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

0.45

60.9

40.2

Minor 5ss

44.8

-0.6

2.6

57.7

46.6

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

NOX4

Ensembl Gene ID:

ENSAPLG00000012543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038844

175037575 - 175152043

114469