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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175148484_175170539_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175148484 - 175170539

Intron Length:

22056

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTGTAT

U12 Branch Point Sequence:

TATCTCTGGAGA

Flanking Amino Acid:

ISFICPCKTGGQDEAREHSS

Intron Amino Acid Position:

593

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

70.6

41.3

Major BPS

53.8

0.09

1.6

57.4

49.1

Major PPT

92.8

0.96

0.6

88.6

20.9

Minor 5ss

44.8

-0.6

2.6

57.7

46.6

Minor BPS

48.1

-0.1

1.8

61.12

38.6

Associated Gene:

Gene:

NOX4

Ensembl Gene ID:

ENSAPLG00000012543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026753

175037575 - 175171491

133917