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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175170667_175178879_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175170667 - 175178879

Intron Length:

8213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACACAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

GTAAAACAACCT

Flanking Amino Acid:

GYDYEYLQEPALDSFQEFLI

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.2

67.8

39.3

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

36.8

-1.5

3.1

47.7

Minor BPS

32.9

-1.2

2.1

49.74

42.6

Associated Gene:

Gene:

TYR

Ensembl Gene ID:

ENSAPLG00000012676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043336

175170443 - 175221236

50794

ENSAPLT00000013210

175170443 - 175221236

50794