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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175199286_175205055_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

175199286 - 175205055

Intron Length:

5770

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAA|GCACACATA

5'SS Class:

weak_major

3'SS Sequence:

CTTGAATATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

TCCTCTTGAATA

Flanking Amino Acid:

TQNPLLPPKISFADPRTAIS

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.8

0.23

1.3

62.1

42.2

Major BPS

75.8

0.64

65.8

Major PPT

69.6

0.44

62.1

42.5

Minor 5ss

32.6

-2

4.2

47.4

Minor BPS

63.1

0.41

1.4

67.43

39.9

Associated Gene:

Gene:

TYR

Ensembl Gene ID:

ENSAPLG00000012676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013210

175170443 - 175221236

50794