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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175199286_175220317_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175199286 - 175220317

Intron Length:

21032

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACTTAAG

5'SS Class:

major

3'SS Sequence:

CTTGAATATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

TCCTCTTGAATA

Flanking Amino Acid:

IVSELSYLTLGFADPRTAIS

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

70.9

40.8

Major BPS

75.8

0.64

65.8

Major PPT

69.6

0.44

62.1

42.5

Minor 5ss

34.1

-1.8

2.9

42.2

44.5

Minor BPS

63.1

0.41

1.4

67.43

39.9

Associated Gene:

Gene:

TYR

Ensembl Gene ID:

ENSAPLG00000012676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043336

175170443 - 175221236

50794