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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175261990_175385805_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175261990 - 175385805

Intron Length:

123816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGCATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTAATACAT

Flanking Amino Acid:

WTYVSAVHTEGNYGESGMEA

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.52

70.9

40.1

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

44.8

-0.3

2.1

69.65

40.7

Associated Gene:

Gene:

GRM5

Ensembl Gene ID:

ENSAPLG00000009575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010003

175253254 - 175528231

274978