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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175471696_175486569_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175471696 - 175486569

Intron Length:

14874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TCTTCCTCAACA

Flanking Amino Acid:

ENPKYNKTCTSQMTLRTQHV

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

77.9

0.63

0.8

73.7

29.9

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

77.6

0.86

1.5

83.78

36.8

Associated Gene:

Gene:

GRM5

Ensembl Gene ID:

ENSAPLG00000009575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010003

175253254 - 175528231

274978