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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175486817_175492034_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175486817 - 175492034

Intron Length:

5218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGTTA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTCCAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

CTCAGCTTATTT

Flanking Amino Acid:

LFDENGDSPGRYEIMNFKKM

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

77.6

Major BPS

72.7

0.57

72.1

31.1

Major PPT

66.7

0.38

1.1

67.1

38.4

Minor 5ss

40.4

-1.1

3.3

55.8

48.3

Minor BPS

47.2

-0.1

2.1

63.8

Associated Gene:

Gene:

GRM5

Ensembl Gene ID:

ENSAPLG00000009575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010003

175253254 - 175528231

274978