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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175496172_175504201_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175496172 - 175504201

Intron Length:

8030

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTCT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

LGSWPNDELTGCDLIPVQYL

Intron Amino Acid Position:

570

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

75.1

41.1

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

91.9

0.94

0.5

89.3

19.5

Minor 5ss

34.5

-1.8

2.8

42.5

44.3

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

GRM5

Ensembl Gene ID:

ENSAPLG00000009575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010003

175253254 - 175528231

274978