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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175505142_175519395_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175505142 - 175519395

Intron Length:

14254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAGTTT

5'SS Class:

strong_major

3'SS Sequence:

CGTGATTTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGTGAT

U12 Branch Point Sequence:

TTGTCGTGATTT

Flanking Amino Acid:

KRRGSSGETLRYKGRRLAPH

Intron Amino Acid Position:

883

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

81.9

32.1

Major BPS

68.7

0.46

1.3

59.3

47.1

Major PPT

64.7

0.33

62.9

42.7

Minor 5ss

-0.9

3.5

64.1

47.4

Minor BPS

47.4

-0.1

2.3

72.44

44.9

Associated Gene:

Gene:

GRM5

Ensembl Gene ID:

ENSAPLG00000009575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010003

175253254 - 175528231

274978