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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175602912_175603613_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175602912 - 175603613

Intron Length:

702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTGTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

AACTCTTGAAGT

Flanking Amino Acid:

QVVSCSQYSQGCDGGFPYLI

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

80.7

33.8

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

81.6

0.71

0.9

81.7

35.4

Minor 5ss

35.6

-1.6

2.6

35.6

40.5

Minor BPS

53.2

0.18

1.8

68.18

42.7

Associated Gene:

Gene:

CTSC

Ensembl Gene ID:

ENSAPLG00000009381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023432

175585696 - 175604190

18495

ENSAPLT00000009776

175579406 - 175604190

24785