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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175883687_175884985_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

175883687 - 175884985

Intron Length:

1299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

ATTGATTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

CAACCTTTAAGG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.5

27.6

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

79.4

0.66

0.9

Minor 5ss

42.2

-0.9

2.7

50.9

39.6

Minor BPS

49.6

-0.1

1.7

50.6

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028724

175845639 - 175887485

41847