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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175885069_175887207_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

175885069 - 175887207

Intron Length:

2139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

TATGTATTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

ATTTTGGTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

79.5

29.4

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

71.5

0.48

63.8

45.9

Minor 5ss

39.8

-1.1

3.2

53.2

Minor BPS

50.7

0.1

2.6

81.49

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028724

175845639 - 175887485

41847