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Intron Name: Anas_platyrhynchos_platyrhynchos_1_175930661_175932822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175930661 - 175932822

Intron Length:

2162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGTGAA

5'SS Class:

major

3'SS Sequence:

GTGCTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TACAAGTTAATA

Flanking Amino Acid:

LALTKKLMDKVCKHGPRHRC

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

66.7

34.3

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

0.72

0.9

76.5

37.5

Minor 5ss

28.5

-2.5

3.1

31.7

42.6

Minor BPS

46.5

-0.2

2.2

58.13

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006242

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006484

175915837 - 176016523

100687