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Intron Name: Anas_platyrhynchos_platyrhynchos_1_176117943_176126872_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

176117943 - 176126872

Intron Length:

8930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TCCGGTGGTATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TAGCAACTAACT

Flanking Amino Acid:

FMSLLVGITSGQTFLIYHKK

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

74.1

36.6

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

58.9

0.2

52.4

41.7

Minor 5ss

38.1

-1.3

3.1

49.4

46.8

Minor BPS

45.7

-0.2

2.1

66.42

Associated Gene:

Gene:

FZD4

Ensembl Gene ID:

ENSAPLG00000006281

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027279

176115640 - 176127027

11388