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Intron Name: Anas_platyrhynchos_platyrhynchos_1_176257443_176328817_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

176257443 - 176328817

Intron Length:

71375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGATGCT

5'SS Class:

major

3'SS Sequence:

CTTCTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTAAT

U12 Branch Point Sequence:

GCCAGCTTAATG

Flanking Amino Acid:

DITRNPHLNKGMAFTLQERL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

72.1

37.7

Major BPS

69.2

0.48

1.3

71.9

Major PPT

80.7

0.69

0.7

31.8

Minor 5ss

33.3

-1.9

3.6

49.9

46.5

Minor BPS

48.1

-0.2

1.9

48.21

45.5

Associated Gene:

Gene:

ME3

Ensembl Gene ID:

ENSAPLG00000006405

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022829

176257251 - 176386441

129191