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Intron Name: Anas_platyrhynchos_platyrhynchos_1_176328952_176330038_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

176328952 - 176330038

Intron Length:

1087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGTCAA

5'SS Class:

major

3'SS Sequence:

TTATTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATATATTTATTT

Flanking Amino Acid:

NYENKSNDLDKYIVLMTLQD

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

69.6

36.5

Major BPS

88.7

0.96

0.8

36.5

Major PPT

81.6

0.71

87.1

30.6

Minor 5ss

41.3

-1

2.8

49.5

41.2

Minor BPS

54.1

0.21

1.7

72.08

39.1

Associated Gene:

Gene:

ME3

Ensembl Gene ID:

ENSAPLG00000006405

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022829

176257251 - 176386441

129191

ENSAPLT00000006722

176293453 - 176386441

92989