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Intron Name: Anas_platyrhynchos_platyrhynchos_1_176371673_176381602_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

176371673 - 176381602

Intron Length:

9930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

CTTGCCAAATCC

Flanking Amino Acid:

RYCTFNDDIQGTASVAVAGI

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

80.7

33.8

Major BPS

0.65

1.1

77.4

37.3

Major PPT

89.8

0.9

0.6

21.8

Minor 5ss

35.6

-1.6

2.6

35.6

40.5

Minor BPS

43.7

-0.5

2.2

58.62

46.3

Associated Gene:

Gene:

ME3

Ensembl Gene ID:

ENSAPLG00000006405

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022829

176257251 - 176386441

129191

ENSAPLT00000006722

176293453 - 176386441

92989