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Intron Name: Anas_platyrhynchos_platyrhynchos_1_176384488_176385136_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

176384488 - 176385136

Intron Length:

649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTCCAAG

5'SS Class:

weak_major

3'SS Sequence:

CTCTTCTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAGAC

U12 Branch Point Sequence:

TTTCCGTAAACT

Flanking Amino Acid:

SDDIFLLTAESIAAEVTEQN

Intron Amino Acid Position:

524

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.6

0.13

1.3

53.6

44.9

Major BPS

54.1

0.1

1.2

52.4

43.3

Major PPT

83.5

0.75

0.7

76.7

Minor 5ss

46.7

-0.3

2.3

57.7

46.7

Minor BPS

57.9

0.33

2.4

85.35

Associated Gene:

Gene:

ME3

Ensembl Gene ID:

ENSAPLG00000006405

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022829

176257251 - 176386441

129191

ENSAPLT00000006722

176293453 - 176386441

92989