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Intron Name: Anas_platyrhynchos_platyrhynchos_1_176726407_176836114_R

Intron Information:

Intron Rank:

134674

Intron Class:

major

Intron Phase:

Intron Coordinates:

176726407 - 176836114

Intron Length:

109708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGAGTG

5'SS Class:

major

3'SS Sequence:

CTTTGTATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

AATCTATCAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.3

69.9

41.1

Major BPS

82.2

0.8

0.9

81.6

Major PPT

84.2

0.77

0.8

81.4

34.9

Minor 5ss

29.5

-2.4

3.3

38.5

46.5

Minor BPS

47.2

-0.2

1.7

57.03

34.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023315

176726075 - 176838162

112088

ENSAPLT00000023892

176726075 - 176837114

111040